BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H06LP1|AL430454
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig891 1737 0.0
>3x_Contig891
Length = 5018
Score = 1737 bits (872), Expect = 0.0
Identities = 901/914 (98%), Gaps = 1/914 (0%)
Strand = Plus / Minus
Query: 3 catcaatgttgcgttacagtacggaatcatgaatttgaaccaacatatcaaawagaggcc 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2959 catcaatgttgcgttacagtacggaatcatgaatttgaaccaacatatcaaattgaggcc 2900
Query: 63 ggggawwccctaacaaccgatgcttgcgaaacccacaaaatcaatcarcgaggagttgga 122
||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 2899 ggggattcccttacaaccgatgcttgcgaaacccacaaaatcaatcagcgaggtgttgga 2840
Query: 123 caggttccagggcactaagtttacctgwgagwacaaatatgacggtgaaagagcacaagt 182
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 2839 caggttccagggcactaagtttacctgtgagtacaaatatgacggtgaaagagcacaagt 2780
Query: 183 gcatttgtgtagggatggatctatgaagatttattcacgtaacggagaagacatgacaga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2779 gcatttgtgtagggatggatctatgaagatttattcacgtaacggagaagacatgacaga 2720
Query: 243 aaggtaccccgagatcgatgtaaagcattatgttaaagatttgggcgccacgaaatcgtt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2719 aaggtaccccgagatcgatgtaaagcattatgttaaagatttgggcgccacgaaatcgtt 2660
Query: 303 cattgtagatagcgaagcntncgcgtgggatcaagaacagggcaagattcttccattcca 362
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2659 cattgtagatagcgaagcggtcgcgtgggatcaagaacagggcaagattcttccattcca 2600
Query: 363 agtactaagtacaaggaagcgtaagggagtagaattgaaagacgtgaaggtacgtgtatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2599 agtactaagtacaaggaagcgtaagggagtagaattgaaagacgtgaaggtacgtgtatg 2540
Query: 423 tctttatgctttcgatatactatgtctaaacgacgaacccttgattaacaagtcgttcca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 tctttatgctttcgatatactatgtctaaacgacgaacccttgattaacaagtcgttcca 2480
Query: 483 tgaaagacgtcagatattactagacacgttcaacggaacccaaggtcaattcgattttgc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 tgaaagacgtcagatattactagacacgttcaacggaacccaaggtcaattcgattttgc 2420
Query: 543 gaacgaactaacaaccactaatttcgatgaactacagaagtatctagaccaatccgtgaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2419 gaacgaactaacaaccactaatttcgatgaactacagaagtatctagaccaatccgtgaa 2360
Query: 603 agactcatgcgagggcctcatggtcaagatgttagaaggagaggagtcccattacgaacc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2359 agactcatgcgagggcctcatggtcaagatgttagaaggagaggagtcccattacgaacc 2300
Query: 663 cagtaagagatcgagaaactggttaaaattgaagaaggattacttggaaggtgtcgggga 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 cagtaagagatcgagaaactggttaaaattgaagaaggattacttggaaggtgtcgggga 2240
Query: 723 ctccctagacctagtggtccttggagcctactatggacgcgggaaaagaacaggcaccta 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2239 ctccctagacctagtggtccttggagcctactatggacgcgggaaaagaacaggcaccta 2180
Query: 783 cggtggattcctcttgggctgctacaacttggattcagaggaattcgaaacatgttgcaa 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2179 cggtggattcctcttgggctgctacaacttggattcagaggaattcgaaacatgttgcaa 2120
Query: 843 gataggaacaggcttcagcgatgagatgttacaagatttgtataccaaattgaaggaca- 901
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2119 gataggaacaggcttcagcgatgagatgttacaagatttgtataccaaattgaaggacac 2060
Query: 902 cacagtagaacacc 915
||||||||||||||
Sbjct: 2059 cacagtagaacacc 2046
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5239
Number of Sequences: 1807
Number of extensions: 5239
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)